BackAuthor: Mazzamuto Giacomo Category: Papers Journals 1) Universal autofocus for quantitative volumetric microscopy of whole mouse brains in NATURE METHODSBy: Silvestri L., Mullenbroich MC., Costantini I., Di Giovanna AP., Mazzamuto G., Franceschini A., Kutra D., Kreshuk A., Checcucci C., Toresano LO., Frasconi P., Sacconi L., Pavone FS. Year: 2021 (IF.: 47.990 Cit.: 31 DOI: 10.1038/s41592-021-01208-1)
2) A cellular resolution atlas of Broca’s area in SCIENCE ADVANCESBy: Costantini I., Morgan L., Yang JR., Balbastre Y., Varadarajan D., Pesce L., Scardigli M., Mazzamuto G., Gavryusev V., Castelli FM., Roffilli M., Silvestri L., Laffey J., Raia S., Varghese M., Wicinski B., Chang SB., Chen IA., Wang H., Cordero D., Vera M., Nolan J., Nestor K., Mora J., Iglesias JE., Pallares EG., Evancic K., Augustinack JC., Fogarty M., Dalca AV., Frosch MP., Magnain C., Frost R., van der Kouwe A., Chen SC., Boas DA., Pavone FS., Fischl B., Hof PR. Year: 2023 (IF.: 11.700 Cit.: 8 DOI: 10.1126/sciadv.adg3844)
3) Brain-wide neuron quantification toolkit reveals strong sexual dimorphism in the evolution of fear memory in CELL REPORTSBy: Franceschini A., Mazzamuto G., Checcucci C., Chicchi L., Fanelli D., Costantini I., Passani MB., Silva BA., Pavone FS., Silvestri L. Year: 2023 (IF.: 7.500 Cit.: 2 DOI: 10.1016/j.celrep.2023.112908)
4) Photonic bands, superchirality, and inverse design of a chiral minimal metasurface in NANOPHOTONICSBy: Zanotto S., Mazzamuto G., Riboli F., Biasiol G., La Rocca G. C., Tredicucci A., Pitanti A. Year: 2019 (IF.: 7.491 Cit.: 19 DOI: 10.1515/nanoph-2019-0321)
5) Photostable Molecules on Chip: Integrated Sources of Nonclassical Light in ACS PHOTONICSBy: Lombardi P.; Ovvyan A. P.; Pazzagli S.; Mazzamuto G.; Kewes G.; Neitzke O.; Gruhler N.; Benson O.; Pernice W. H. P.; Cataliotti F. S.; Toninelli C. Year: 2018 (IF.: 7.143 Cit.: 53 DOI: 10.1021/acsphotonics.7b00521)
6) 3D molecular phenotyping of cleared human brain tissues with light-sheet fluorescence microscopy in COMMUNICATIONS BIOLOGYBy: Pesce Luca; Scardigli Marina; Gavryusev Vladislav; Laurino Annunziatina; Mazzamuto Giacomo; Brady Niamh; Sancataldo Giuseppe; Silvestri Ludovico; Destrieux Christophe; Hof Patrick R.; Costantini Irene; Pavone Francesco S. Year: 2022 (IF.: 5.900 Cit.: 22 DOI: 10.1038/s42003-022-03390-0)
7) Necklace state hallmark in disordered 2D photonic systems in ACS PHOTONICSBy: Sgrignuoli F., Mazzamuto G., Caselli N., Intonti F., Cataliotti FS., Gurioli M., Toninelli C. Year: 2015 (IF.: 5.404 Cit.: 22 DOI: 10.1021/acsphotonics.5b00422)
8) Autofluorescence enhancement for label‑free imaging of myelinated fibers in mammalian brains in SCIENTIFIC REPORTSBy: Costantini I., Baria E., Sorelli M., Matuschke F., Giardini F., Menzel M., Mazzamuto G., Silvestri L., Cicchi R., Amunts K., Axer M., Pavone F.S. Year: 2021 (IF.: 4.996 Cit.: 19 DOI: 10.1038/s41598-021-86092-7)
9) A Guide to Perform 3D Histology of Biological Tissues with Fluorescence Microscopy in INTERNATIONAL JOURNAL OF MOLECULAR SCIENCESBy: Laurino A., Franceschini A., Pesce L., Cinci L., Montalbano A., Mazzamuto G., Sancataldo G., Nesi G., Costantini I., Silvestri L., Pavone FS. Year: 2023 (IF.: 4.900 Cit.: 5 DOI: 10.3390/ijms24076747)
10) Studying the trafficking of labeled trodusquemine and its application as nerve marker for light-sheet and expansion microscopy in FASEB JOURNALBy: Capitini C., Pesce L., Fani G., Mazzamuto G., Genovese M., Franceschini A., Paoli P., Pieraccini G., Zasloff M., Chiti F., Pavone FS., Calamai M. Year: 2022 (IF.: 4.800 Cit.: 2 DOI: 10.1096/fj.202201276R)
11) Microscopy-BIDS: An Extension to the Brain Imaging Data Structure for Microscopy Data in FRONTIERS IN NEUROSCIENCEBy: Bourget MH., Kamentsky L., Ghosh S., Mazzamuto G., Lazari A., Markiewicz CJ., Oostenveld R., Niso G., Halchenko YO., Lipp I., Takerkart S., Toussaint PJ., Khan AR., Nilsonne G., Castelli FM., Cohen-Adad J. Year: 2022 (IF.: 4.300 Cit.: 11 DOI: 10.3389/fnins.2022.871228)
12) A realistic fabrication and design concept for quantum gates based on single emitters integrated in plasmonic-dielectric waveguide structures in SCIENTIFIC REPORTSBy: Kewes G., Schoengen M., Neitzke O., Lombardi P., Schönfeld R.S., Mazzamuto G., Schell A.W., Probst J., Wolters J., Löchel B., Toninelli C., Benson O. Year: 2016 (IF.: 4.259 Cit.: 37 DOI: 10.1038/srep28877)
13) Fiber enhancement and 3D orientation analysis in label-free two-photon fluorescence microscopy in SCIENTIFIC REPORTSBy: Sorelli Michele; Costantini Irene; Bocchi Leonardo; Axer Markus; Pavone Francesco Saverio; Mazzamuto Giacomo Year: 2023 (IF.: 3.800 Cit.: 3 DOI: 10.1038/s41598-023-30953-w)
14) Deducing effective light transport parameters in optically thin systems in NEW JOURNAL OF PHYSICSBy: Mazzamuto G., Pattelli L., Toninelli C., Wiersma D. Year: 2016 (IF.: 3.786 Cit.: 12 DOI: 10.1088/1367-2630/18/2/023036)
15) Large-scale, cell-resolution volumetric mapping allows layer-specific investigation of human brain cytoarchitecture in BIOMEDICAL OPTICS EXPRESSBy: Costantini I., Mazzamuto G., Roffilli M., Laurino A., Castelli FM., Neri M., Lughi G., Simonetto A., Lazzeri E., Pesce L., Destrieux C., Silvestri L., Conti V., Guerrini R., Pavone FS Year: 2021 (IF.: 3.562 Cit.: 17 DOI: 10.1364/BOE.415555)
16) Single-molecule study for a graphene-based nano-position sensor in NEW JOURNAL OF PHYSICSBy: Mazzamuto G., Tabani A., Pazzagli S., Rizvi S., Reserbat-Plantey A., Schädler K., Navickaite G., Gaudreau L., Cataliotti F.S., Koppens F., Toninelli C. Year: 2014 (IF.: 3.558 Cit.: 22 DOI: 10.1088/1367-2630/16/11/113007)
17) Comparison of Different Tissue Clearing Methods for Three-Dimensional Reconstruction of Human Brain Cellular Anatomy Using Advanced Imaging Techniques in FRONTIERS IN NEUROANATOMYBy: Scardigli M., Pesce L., Brady N., Mazzamuto G., Gavryusev V., Silvestri L., Hof PR., Destrieux C., Costantini I., Pavone FS. Year: 2021 (IF.: 3.543 Cit.: 10 DOI: 10.3389/fnana.2021.752234)
18) Experimental imaging and Monte Carlo modeling of ultrafast pulse propagation in thin scattering slabs in JOURNAL OF BIOMEDICAL OPTICSBy: Pattelli L., Mazzamuto G. Year: 2022 (IF.: 3.500 Cit.: 4 DOI: 10.1117/1.JBO.27.8.083020)
19) Fast whole-brain imaging of seizures in zebrafish larvae by two-photon light-sheet microscopy in BIOMEDICAL OPTICS EXPRESSBy: De Vito G., Turrini L., Müllenbroich C., Ricci P., Sancataldo G., Mazzamuto G., Tiso N., Sacconi L., Fanelli D., Silvestri L., Vanzi F., Pavone F.S. Year: 2022 (IF.: 3.400 Cit.: 18 DOI: 10.1364/BOE.434146)
20) Diffusive light transport in semitransparent media in PHYSICAL REVIEW ABy: Pattelli L., Mazzamuto G., Wiersma D., Toninelli C. Year: 2016 (IF.: 2.925 Cit.: 8 DOI: 10.1103/PhysRevA.94.043846)
21) CELES: CUDA-accelerated simulation of electromagnetic scattering by large ensembles of spheres in JOURNAL OF QUANTITATIVE SPECTROSCOPY & RADIATIVE TRANSFERBy: Egel A., Pattelli L., Mazzamuto G., Wiersma D.S., Lemmer U. Year: 2017 (IF.: 2.600 Cit.: 73 DOI: 10.1016/j.jqsrt.2017.05.010)
22) High-fidelity imaging in brain-wide structural studies using light-sheet microscopy in ENEUROBy: Müllenbroich M.C., Silvestri L., Di Giovanna A.P., Mazzamuto G., Costantini I., Sacconi L., Pavone F.S. Year: 2018 (Cit.: 13 DOI: 10.1523/ENEURO.0124-18.2018)
23) Deep learning-based localization algorithms on fluorescence human brain 3D reconstruction: a comparative study using stereology as a reference in SCIENTIFIC REPORTSBy: Checcucci C., Wicinski B., Mazzamuto G., Scardigli M., Ramazzotti J., Brady N., Pavone FS., Hof PR., Costantini I., Frasconi P. Year: 2024 ( DOI: 10.1038/s41598-024-65092-3)
24) Mapping brain state-dependent sensory responses across the mouse cortex in ISCIENCEBy: Montagni E., Resta F., Tort-Colet N., Scaglione A., Mazzamuto G., Destexhe A., Pavone FS., Mascaro ALA. Year: 2024 ( DOI: 10.1016/j.isci.2024.109692)
25) Non-self-similar light transport in scattering media in PHYSICAL REVIEW RESEARCHBy: Pini E., Mazzamuto G., Riboli F., Wiersma DS., Pattelli L. Year: 2024 ( DOI: 10.1103/PhysRevResearch.6.L032026)
26) Optical Clearing and Labeling for Light-sheet Fluorescence Microscopy in Large-scale Human Brain Imaging in JOVE-JOURNAL OF VISUALIZED EXPERIMENTSBy: Di Meo D., Ramazzotti J., Scardigli M., Cheli F., Pesce L., Brady N., Mazzamuto G., Costantini I., Pavone FS. Year: 2024 ( DOI: 10.3791/65960)
27) Segmentation of supragranular and infragranular layers in ultra-high-resolution 7T ex vivo MRI of the human cerebral cortex in CEREBRAL CORTEXBy: Zeng XR., Puonti O., Sayeed A., Herisse R., Mora J., Evancic K., Varadarajan D., Balbastre Y., Costantini I., Scardigli M., Ramazzotti J., Di Meo D., Mazzamuto G., Pesce L., Brady N., Cheli F., Pavone F.S., Hof P.R., Frost R., Augustinack J., Van der Kouwe A., Iglesias J.E., Fischl B. Year: 2024 ( DOI: 10.1093/cercor/bhae362)
